The development of smartphones, specifically their cameras, and imaging technologies has enabled their use as sensors/measurement tools. Here we aimed to evaluate the applicability of a fast and noninvasive method for the estimation of total chlorophyll (Chl), Chl a, Chl b, and carotenoids (Car) content of soybean plants using a smartphone camera. Single leaf disc images were obtained using a smartphone camera. Subsequently, for the same leaf discs, a Chl meter was used to obtain the relative index of Chl and the photosynthetic pigments were then determined using a classic method. The RGB, HSB and CIELab color models were extracted from the smartphone images and correlated to Chl values obtained using a Chl meter and by a standard laboratory protocol. The smartphone camera was sensitive enough to capture successfully a broad range of Chl and Car contents seen in soybean leaves. Although there was a variation between color models, some of the proposed regressions (e.g., the S and b index from HSB and Lab color models and NRI [RGB model]) were very close to the Chl meter values. Based on our findings, smartphones can be used for rapid and accurate estimation of soybean and Car contents in soybean leaves., J. P. G. Rigon, S. Capuani, D. M. Fernandes, T. M. Guimarães., and Obsahuje bibliografii
Nucleoside diphosphate kinases (NDPK) are key enzymes involved in the intracellular nucleotide maintenance in all living organisms, especially in trypanosomatids which are unable to synthesise purines de novo. Four putative NDPK isoforms were identified in the Trypanosoma cruzi Chagas, 1909 genome but only two of them were characterised so far. In this work, we studied a novel isoform from T. cruzi called TcNDPK3. This enzyme presents an atypical N-terminal extension similar to the DM10 domains. In T. cruzi, DM10 sequences targeted other NDPK isoform (TcNDPK2) to the cytoskeleton, but TcNDPK3 was localised in glycosomes despite lacking a typical peroxisomal targeting signal. In addition, TcNDPK3 was found only in the bloodstream trypomastigotes where glycolytic enzymes are very abundant. However, TcNDPK3 mRNA was also detected at lower levels in amastigotes suggesting regulation at protein and mRNA level. Finally, 33 TcNDPK3 gene orthologs were identified in the available kinetoplastid genomes. The characterisation of new glycosomal enzymes provides novel targets for drug development to use in therapies of trypanosomatid associated diseases., María de los Milagros Cámara, León Bouvier, Chantal Reigada, Fabio A. Digirolamo, Melisa Sayé, Claudio A. Pereira., and Obsahuje bibliografii
PAM (pulse amplitude modulation) fluorometers can be used to estimate the electron transport rate (ETR) [μmol(e-) m-2 s-1] from photosynthetic yield determinations, provided the absorptance (Abtλ) of the photoorganism is known. The standard assumed value used for absorptance is 0.84 (leaf absorptance factor, AbtF). We described a reflectance-absorptancetransmittance (RAT) meter for routine experimental measurements of the actual absorptance of leaves. The RAT uses a red-green-blue (RGB) LED diode light source to measure absorptances at wavelengths suitable for use with PAM fluorometers and infrared gas analysers. Results using the RAT were compared to Abtλ spectra using a Taylor integrating sphere on bird’s nest fern (Asplenium nidus), banana, Doryanthes excelsa, Kalanchoe daigremontiana, and sugarcane. Parallel venation had no significant effect upon Abt465 in banana, Doryanthes, a Dendrobium orchid, pineapple, and sugarcane, but there was a slight difference in the case of the fern A. nidus. The average Abt465 (approximately 0.96) and Abt625 (approximately 0.89) were approximately 14% and 6% higher than the standard value (AbtF = 0.84). The PAR-range Abt400-700 was only approximately 5% higher than the standard value (approximately 0.88) based on averaged absorptance from the blue, green, and red light data and from where the RGB-diode was used as a ‘white’ light source. In some species, absorptances at blue and red wavelengths are quite different (e.g. water lily). Reflectance measurements of leaves using the RAT would also be useful for remote sensing studies., R. J. Ritchie, J. W. Runcie., and Obsahuje bibliografii
The Australian species of the genus Coelioxys Latreille are revised. Six species are recognized: Coelioxys albolineata Cockerell, 1905; Coelioxys froggatti Cockerell, 1911; Coelioxys reginae Cockerell, 1905; Coelioxys weinlandi Schulz, 1904 and two new species: Coelioxys julia sp. n. and Coelioxys tasmaniana sp. n. Three names are synonymized: Coelioxys biroi Friese, 1909 syn. n. and Coelioxys albolineata darwiniensis Cockerell, 1929 syn. n. under Coelioxys albolineata, and Coelioxys victoriae Rayment, 1935 syn. n. under Coelioxys froggatti. Species descriptions and redescriptions, illustrations, distribution maps, floral records and a key to both sexes of all species are provided., Léo Correia da Rocha-Filho., and Obsahuje bibliografii
Light is critical in determining plant structure and functioning in dune ecosystems, which are characterised by high incident and reflected radiation. Light variations demand great plasticity of the photosynthetic apparatus. This study assessed the phenotypic plasticity of foredune species by analysing their light response and dark recovery curves measured under field conditions. We also addressed the question how coexisting species, structurally distinct, differed in their photochemical efficiency in response to short-term changes in light. Finally, we examined how the varying intensity of stressors operating along a dune gradient affected responses to light. The species differed in light use strategies but showed similar patterns of the dark recovery. Species differences in photochemistry varied seasonally, with species being winter specialists, summer specialist or generalists. Some aspects of their photochemistry varied significantly along the gradient. Unexpectedly, other traits did not vary as predicted. For example, changes in light efficiency of plants along the gradient were not consistent with assumed directional changes in the severity of stressors. The different light use strategies observed in coexisting species did not conform to the prediction that stressors constrain the range of possible functional designs in harsh environments. However, the species followed very similar patterns of post-illumination recovery, which suggests that evolutionary pressures might be acting to maintain similar recovery mechanisms. Our results indicated that dune gradients might be nondirectional, which determines unpredictable patterns of variation in leaf traits along the dune gradient. Seasonal differences in the relative performance may allow species to coexist where otherwise one species would exclude the other., R. Bermúdez, R. Retuerto., and Obsahuje bibliografii
Myxozoans (Cnidaria: Myxozoa) are almost exclusively endoparasites of aquatic vertebrates and invertebrates, with the notable exception being two species of Soricimyxum Prunescu, Prunescu, Pucek et Lom, 2007 described from terrestrial shrews (Soricidae) in central Europe. Myxospores of the two parasites are morphologically indistinguishable, but have SSU rDNA sequences that differ by about 4%. Herein, we report additional molecular and histology data from Soricimyxum fegati Prunescu, Prunescu, Pucek et Lom, 2007 from common shrew (Sorex araneus Linnaeus) from Hungary, and add a new geographic record for S. fegati in pygmy shrew (Sorex minutus Linnaeus) from Slovakia. A limited survey of shrews from the northern United States, Blarina brevicauda Say and Sorex sp. from New York, and Sorex spp. from Oregon, did not discover any infections, which is in stark contrast to the relatively high infection rates (up to 66%) in European shrew populations. We also provide a summary and discussion of literature records of species of Soricimyxum and a host survey. Given the lack of distinguishing morphological or morphometric characters between Soricimyxum spp., and the overlap in vertebrate hosts and geographic ranges, unambiguous identification of these closely related shrew parasites can presently only be achieved through sequence comparison of one or more variable SSU rDNA regions., Csaba Székely, Stephen D. Atkinson, Kálmán Molnár, László Egyed, András Gubányi, Gábor Cech., and Obsahuje bibliografii
Tapeworms of the genus Caryophyllaeus Gmelin, 1790 (Caryophyllidea: Caryophyllaeidae), common parasites of cyprinid fishes, are reviewed and taxonomic status of 42 nominal taxa that have been placed in the genus during its long history is clarified. The following seven species occurring in the Palaearctic Region are recognised as valid: C. laticeps (Pallas, 1781), C. auriculatus (Kulakovskaya, 1961), C. balticus (Szidat, 1941) comb. n. (syn. Khawia baltica Szidat, 1941), C. brachycollis Janiszewska, 1953, C. fimbriceps Annenkova-Chlopina, 1919, C. syrdarjensis Skrjabin, 1913, and newly described Caryophyllaeus chondrostomi sp. n. (= C. laticeps morphotype 4 of Bazsalovicsová et al., 2014) from common nase, Chondrostoma nasus (Linnaeus), found in Austria and Slovakia. The new species differs by the paramuscular or cortical position of preovarian vitelline follicles, a large, robust body (up to 64 mm long), conspicuously long vas deferens, flabellate scolex with small wrinkles on the anterior margin, and anteriormost testes located in a relatively short distance from the anterior extremity. Caryophyllaeus kashmirenses Mehra, 1930 and Caryophyllaeus prussicus (Szidat, 1937) comb. n. are considered to be species inquirendae, C. truncatus von Siebold in Baird, 1853 and C. tuba von Siebold in Baird, 1853 are nomina nuda. Data on the morphology, host spectra, distribution and known life-cycles of valid species are provided. Phylogenetic interrelations of four species of the genus including its type species and newly described C. chondrostomi were assessed based on an analysis of sequences of lsrDNA and cox1. A key to identification of all valid species of Caryophyllaeus is also provided., Daniel Barčák, Mikuláš Oros, Vladimíra Hanzelová, Tomáš Scholz., and Obsahuje bibliografii
Monozoic cestodes of the recently amended genus Promonobothrium Mackiewicz, 1968 (Cestoda: Caryophyllidea), parasites of suckers (Cypriniformes: Catostomidae) in North America, are reviewed, with information on their host specificity, distribution and data on the scolex morphology of seven species studied for the first time using scanning electron microscopy (SEM). Evaluation of type and voucher specimens from museum collections and newly collected material of most species indicated the following valid nominal species: Promonobothrium minytremi Mackiewicz, 1968 (type species); P. ingens (Hunter, 1927); P. hunteri (Mackiewicz, 1963); P. ulmeri (Calentine et Mackiewicz, 1966); P. fossae (Williams, 1974) and P. mackiewiczi (Williams, 1974). Rogersus Williams, 1980 with its only species R. rogersi is transferred to Promonobothrium based on morphological and molecular data. Promonobothrium currani sp. n. and P. papiliovarium sp. n. are described from Ictiobus bubalus (Rafinesque) and Ictiobus niger (Rafinesque), and Erimyzon oblongus (Mitchill), respectively. The newly described species can be distinguished from the other congeners by the morphology of the scolex, the position of the anteriormost vitelline follicles and testes, the presence of postovarian vitelline follicles and the shape of the ovary. Molecular phylogenetic analyses of six species based on sequences of the small and large subunits of the nuclear ribosomal RNA genes (ssrDNA, lsrDNA) confirmed the monophyletic status of the genus and supported the validity of the species analysed. A key to identification of all species of Promonobothrium based on morphological characteristics is provided., Mikuláš Oros, Jan Brabec, Roman Kuchta, Anindo Choudhury, Tomáš Scholz., and Obsahuje bibliografii
Many species of carabid beetles are important pre- and post-dispersal seed feeders of herbaceous plants. Here we summarise data from dissections, field observations, rearing and "cafeteria" experiments on 55 granivorous and 188 omnivorous species that occur in Italy. We tested the hypothesis that seed feeding carabids are restricted to taxa with pronounced morphological adaptations for manipulating and crushing seeds in both the larval and adult stages. The feeding guilds of carabids were rearranged into the following groups: (i) strict predators with long mandibles and predaceous larvae, often depending also on non-prey food; (ii) omnivorous species with stout mandibles and larvae of a seed-eating morphotype; (iii) granivorous species, feeding only on seeds with larvae sometimes of the scarabeoid c-form type. The seed feeding carabids in the Italian fauna belong to the tribe Zabrini (Amara and Zabrus genera) and to all the Harpalinae (sub)tribes, from Anisodactylini to Ditomina. The time of reproduction seems to be associated with habitat preference; wetland or dry open land, rather than true granivorous versus omnivorous habits, but in stenophagous seed feeders, a phenological coincidence with particular plants is sometimes recorded., Federica Talarico, Anita Giglio, Roberto Pizzolotto, Pietro Brandmayr., and Obsahuje bibliografii
Water-filled tree holes are abundant microhabitats in forests worldwide and are inhabited by specialized communities of invertebrates. Despite their importance, the temporal dynamics of communities within and between years are largely unknown. Here, I present a case study on the phenology of insect larvae in two holes in a beech tree (lower and upper canopy) located in southern Germany over a period of three years. I asked whether water temperature and the characteristics of insect larvae at the community and population levels are similar in periodicity every year and whether they differ in the lower and upper canopy. The water temperature in tree holes differed greatly from air temperature, and this effect was more pronounced in the lower than in the upper canopy, which resulted in a lower probability of drying out occurring in the lower canopy. This was associated with a higher species richness in the lower canopy and greater abundance of drought tolerant species in the upper canopy. There was a significant periodicity in larval abundance, biomass, species richness and body size distribution of abundant species in both tree holes, but it was not seasonal. This result indicates that unpredictable drying out of tree holes are more important drivers of tree hole community dynamics than changes in water temperature. The community of larvae in the tree hole in the upper canopy lagged behind that in the lower canopy, which indicates that most species mainly colonize the more stable microhabitats in the lower canopy. Hopefully this case study will encourage future larger-scale phenological studies to test (1) whether the patterns observed in this study can be generalized over larger spatial scales and (2) the relative importance of abiotic and biotic drivers of the dynamics of communities in tree holes., Martin M. Gossner., and Obsahuje bibliografii