Ligula intestinalis (Linnaeus, 1758) is a tapeworm parasite with a worldwide distribution that uses a wide variety of fish species as its second intermediate host. In the present study, we investigated the prevalence and population genetic structure of plerocercoids of L. intestinalis in five common cyprinoid species, roach Rutilus rutilus (Linnaeus), freshwater bream Abramis brama (Linnaeus), white bream Blicca bjoerkna (Linnaeus), bleak Alburnus alburnus (Linnaeus), and rudd Scardinius erythrophthalmus (Linnaeus), collected in six water bodies of the Czech Republic (Milada, Most, Medard, Jordán, Římov and Lipno). Of the six study sites, the highest frequency of parasitism was recorded in Lake Medard (15%). The overall prevalence rate among the species was as follows: roach > rudd ≥ freshwater bream > bleak > white bream. Two mitochondrial genes (cytb and COI) were used to compare the population genetic structure of parasite populations using selected samples from the five fish species. The results of the phylogenetic analysis indicated that all populations of L. intestinalis were placed in Clade A, previously identified as the most common in Europe. At a finer scale, haplotype network and PCoA analyses indicated the possible emergence of host specificity of several mtDNA haplotypes to the freshwater bream. Moreover, pairwise Fixation indices (FST) revealed a significant genetic structure between the parasite population in freshwater bream and other host species. Parasite populations in roach not only showed the highest rate of prevalence but also depicted a maximum number of shared haplotypes with populations from bleak and rudd. Our results suggest that recent ecological differentiation might have influenced tapeworm populations at a fine evolutionary scale. Thus, the differences in prevalence between fish host species in different lakes might be influenced not only by the parasite's ecology, but also by its genetic diversity.
The winter diet of the great cormorant (Phalacrocorax carbo) was studied by means of examining regurgitated pellets, individual fish bones and fish remains collected from below the roosting trees in two sites on the River Vltava in Vyšší Brod and at Slapy Reservoir, Czech Republic, and by analysis of stomach contents of birds shot on the River Vltava in Prague. Using diagnostic bones (os pharyngeum, dentale, maxillare, praeoperculare) and own linear regression equations between measured dimension of the diagnostic bone and fish total length (LT), a total of 1152 fish of 22 species and 6 families were identified in the diet of great cormorants and their sizes were reconstructed. At all three localities on the main stream of the River Vltava, roach (Rutilus rutilus), bream (Abramis brama), bleak (Alburnus alburnus), European chub (Squalius cephalus), European perch (Perca fluviatilis) and ruffe (Gymnocephalus cernuus) made up at least 74.2 % of the cormorants’ diet. A great potential for fish stock losses was identified for the River Vltava at Vyšší Brod and in Prague where the loss of fish due to overwintering great cormorants was estimated to be 22 kg ha–1 and up to 79 kg ha–1 respectively, i.e. belonging among the highest ever published figures for fish withdrawal caused by great cormorants from any inland waters (carp fishponds excluded). Most probably, both great cormorants and anglers are responsible for the decrease in catches of brown trout (Salmo trutta m. fario) and grayling (Thymallus thymallus) from the River Vltava in Vyšší Brod.