Pachyrhizus ahipa (Wedd.) Parodi, originally from Latin America, is an agronomy interesting legume crop due to high seed protein content and saccharides-rich tuber root. Its capacity of adaptation to Mediterranean climate, where heat and water stress are frequently associated, is being tested. Two accessions of P. ahipa (AC 102 and AC 524) differing in field production were compared as concerns the effects of water stress and high temperature on photosynthetic performance. Membrane integrity was also evaluated through electrolyte leakage (injury index, I%), lipid composition, and ultrastructure observations. Short-term heat stress (40 °C) did not affect net photosynthetic rate (PN), stomatal conductance (gs), and most of fluorescence parameters in both accessions, what was consistent with low electrolyte leakage. However, photosynthetic capacity (Pmax) showed a significant reduction, AC 524 being more affected than AC 102. Relative water content (RWC) below 70 % caused a drastic decrease in PN and gs. Fluorescence parameters, Pmax, and I% were affected in the two accessions, which also presented a strong reduction (42 %) in total fatty acids (TFA). Contents of galactolipids were drastically reduced, and changes in their saturation also occurred, namely a decrease in linolenic acid (C18:3) percentage of monogalactosyl-diacylglycerol (MGDG) in both accessions. Thylakoid ultrastructure in AC 524 submitted to drought showed disorganisation of grana stacking. Mitochondria presented signs of injured cristae. When water-stressed plants were subjected to high temperature, photosynthesis and fluorescence parameters did not show significant additional changes in both accessions. The exposure of drought stressed plants to 40 °C further increased electrolyte leakage in AC 524, but not in AC 102. Chloroplasts, mitochondria, and plasmalemma showed an increased disorganisation. Vesicles appeared in the cytoplasm, which became electron-transparent, reflecting a strong reduction in the number of ribosomes. Hence AC 102 was less affected than AC 524 as regards some components of photosynthetic process, namely Pmax and membrane integrity. This could account for its better yield production previously observed in field grown plants. and M. C. Matos ... [et al.].